LARIMICHTHYS CROCEA" /> 澶ч粍楸�(<i>Larimichthys crocea</i>)鏂板搧绉嶁€滀笢娴�1鍙封€濅綋闀跨浉鍏崇殑DArT鏍囪绛涢€�
   娴锋磱涓庢箹娌�  2016, Vol. 47 Issue (5): 1047-1054   PDF    
http://dx.doi.org/10.11693/hyhz20160600128
涓浗娴锋磱婀栨布瀛︿細涓诲姙銆�
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鏂囩珷淇℃伅

寰愬湥閽�, 鏋楀媺, 闂澗鏉�, 鍙查洦绾�, 鑻椾寒, 鏉庢槑浜�, 闄堢偗. 2016.
XU Sheng-Zhao, LIN Mian, YAN Song-Song, SHI Yu-Hong, Miao Liang, LI Ming-Yun, CHEN Jiong. 2016.
澶ч粍楸�(Larimichthys crocea)鏂板搧绉嶁€滀笢娴�1鍙封€濅綋闀跨浉鍏崇殑DArT鏍囪绛涢€�
IDENTIFICATION OF BODY-LENGTH-RELATED DART MARKERS IN NEW CALTIVAR "DONGHAI NO.1" OF LARGE YELLOW CROAKER LARIMICHTHYS CROCEA
娴锋磱涓庢箹娌�, 47(5): 1047-1054
Oceanologia et Limnologia Sinica, 47(5): 1047-1054.
http://dx.doi.org/10.11693/hyhz20160600128

鏂囩珷鍘嗗彶

鏀剁ǹ鏃ユ湡锛�2016-06-20
鏀朵慨鏀圭ǹ鏃ユ湡锛�2016-07-11
澶ч粍楸�(Larimichthys crocea)鏂板搧绉嶁€滀笢娴�1鍙封€濅綋闀跨浉鍏崇殑DArT鏍囪绛涢€�
寰愬湥閽�, 鏋楀媺, 闂澗鏉�, 鍙查洦绾�, 鑻椾寒, 鏉庢槑浜�, 闄堢偗     
瀹佹尝澶у娴锋磱瀛﹂櫌 鐢熺墿鍖栧涓庡垎瀛愮敓鐗╁瀹為獙瀹� 瀹佹尝 315211
鎽樿锛� 澶ч粍楸硷紙Larimichthys crocea锛夋槸鎴戝浗閲嶈鐨勬捣浜х粡娴庨奔绫汇€傚洜澶氬勾鏈姞閫夎偛鐨勭疮浠e吇娈栵紝鍏绘畺澶ч粍楸肩敓闀跨紦鎱紝鎬ф棭鐔熴€佸厤鐤姏浣庝笅锛屼簾闇€瀵瑰吇娈栧ぇ榛勯奔杩涜閬椾紶鏀硅壇銆傚鏍锋€ц姱鐗囨妧鏈紙Diversity arrays technology锛孌ArT锛夊叿鏈夐珮閫氶噺鍜屼綆鎴愭湰鐨勬樉钁楃壒鐐癸紝涓嶉渶瑕佹槑纭墿绉嶇殑鍩哄洜缁凞NA搴忓垪淇℃伅锛屽洜鑰屽箍娉涘簲鐢ㄤ簬鍔ㄦ鐗╅仐浼犲浘璋卞埗浣滃拰閬椾紶澶氭牱鎬у垎鏋愩€傛湰鐮旂┒鏃ㄥ湪閲囩敤DArT鎶€鏈壌瀹氫笌鈥滀笢娴�1鍙封€濆ぇ榛勯奔浣撻暱鐩稿叧鍒嗗瓙鏍囪銆傞鍏堥殢鏈烘祴寰椻€滀笢娴�1鍙封€濆ぇ榛勯奔199涓釜浣撲綋闀匡紝鍧囧€间负13.45cm锛岀鍚堟鎬佸垎甯冿紙P>0.05锛夛紝鈥滄瀬绔ぇ缇や綋鈥濆拰鈥滄瀬绔皬缇や綋鈥濅箣闂村樊寮傛樉钁楋紙P < 0.01锛夈€傜劧鍚庨噰鐢�7缁勯檺鍒舵€у唴鍒囬叾缁勫悎锛�PstI/AluI銆�PstI/BanII銆�PstI/Bsp1286I銆�PstI/BstNI銆�PstI/Hae鈪€€�PstI/RsaI銆�PstI/TaqI锛夊垎鍒繘琛岄叾鍒囷紝鑾峰緱鍩哄洜缁勪唬琛ㄦ€NA鐗囨骞剁敤浜庢枃搴撴瀯寤恒€傛牴鎹鎬佹€у厠闅嗘暟鍜屽鎬佹€х巼纭畾PstI/RsaI閰跺垏缁勫悎涓烘渶浼橀檷浣庡熀鍥犵粍澶嶆潅搴︽柟娉曘€備箣鍚庝粠PstI/RsaI鍩哄洜缁勪唬琛ㄦ€NA鐗囨鏂囧簱涓墿澧炶幏寰�3360涓墖娈碉紝浠ユ涓哄鏍锋€ц姱鐗囨帰閽堣繘琛岃姱鐗囩偣鍒讹紝鏉備氦绛涢€夎幏寰�18涓ぇ榛勯奔浣撻暱鐩稿叧DArT鍊欓€夋爣璁般€傜粡杩囨柊缇や綋鏍锋湰鍐嶆楠岃瘉锛屼粛鏈�8涓狣ArT鏍囪涓庝綋闀跨浉鍏炽€傛湰鐮旂┒鏈夊姪浜庨€夎偛鐢熼暱鎬х姸浼樿壇鐨勫ぇ榛勯奔缇や綋銆�
鍏抽敭璇�锛� 澶ч粍楸�     DArT     浣撻暱     鐢熼暱鎬х姸    
IDENTIFICATION OF BODY-LENGTH-RELATED DART MARKERS IN NEW CALTIVAR "DONGHAI NO.1" OF LARGE YELLOW CROAKER LARIMICHTHYS CROCEA
XU Sheng-Zhao, LIN Mian, YAN Song-Song, SHI Yu-Hong, Miao Liang, LI Ming-Yun, CHEN Jiong     
Laboratory of Biochemistry and Molecular Biology, School of Marine Sciences, Ningbo University, Ningbo 315211, China
Abstract: Large yellow croaker (Larimichthys crocea) is an important marine economic fish in China. However, in recent years, many commercial traits have been degrading due to fast development of fish farming, resulting in lower growth rate, earlier sex maturation, and lower viability. Thus, the need is urgent in genetic improvement of farmed large yellow croaker. Diversity arrays technology (DArT) provides a high-throughput and low-cost whole-genome genotyping platform for the detection and scoring of hundreds of polymorphic loci without any need for prior sequence information. DArT is widely used to create genetic maps and analyze genetic diversity of animals and plants. We used DArT to identify body-length-related molecular marks of the Donghai No.1 caltivar of large yellow croaker. The body lengths of 199 fish were randomly measured and the average was 13.45cm in conformation to normal distribution. The maximal and minimal length groups were significantly different (P < 0.01). PstI representations were digested with seven pairs of different frequent cutters (PstI/AluI, PstI/BanII, PstI/Bsp1286I, PstI/BstNI, PstI/Hae鈪�, PstI/RsaI, PstI/TaqI) and used for libraries construction. PstI/RsaI was selected as optimal complexity reduction method according to the numbers of unique clones and polymorphism levels. An amount of 3360 PstI representations as probes was amplified from the PstI/RsaI library for array preparation. Eighteen DArT candidate marks were screened by hybridization and data statistics. The new selected population was used to verify the candidate marks, and eight DArT markers were significantly associated with body length. These basic data highlight potential application of DArT for marker-assisted selection of large yellow croaker with good growth traits.
Key words: large yellow croaker Larimichthys crocea     diversity arrays technology (DArT)     body length     growth trait    

澶ч粍楸�(Larimichthys crocea)灞炵‖楠ㄩ奔绾层€侀矆褰㈢洰銆佺煶棣栭奔绉戙€侀粍楸煎睘, 鏄垜鍥解€滃洓澶ф捣姘寸粡娴庨奔绫烩€濅箣涓€(濮氬悍绛�, 2008)銆�20涓栫邯90骞翠唬浜哄伐绻佽偛鎴愬姛鍚�, 澶ч粍楸兼垚涓烘垜鍥戒汉宸ヨ偛鑻楅噺鍜屽吇娈栬妯℃渶澶х殑娴锋磱姘翠骇鍏绘畺鍝佺, 鍏剁粡娴庢晥鐩婃樉钁椼€傜敱浜庝笉閲嶈绉嶈川淇濇姢鍜屼汉宸ラ€夎偛, 鐩墠浜哄伐鍏绘畺澶ч粍楸煎湪浣撳舰銆佺敓闀裤€佽倝璐ㄣ€佹€ф垚鐔熴€佹姉閫嗘€с€佹姉鐥呮€х瓑澶氶挓鎬х姸涓婂嚭鐜颁簡琛伴€€, 閬椾紶澶氭牱鎬ч檷浣�, 鍦ㄤ竴瀹氱▼搴︿笂闄愬埗浜嗗叾鍏绘畺涓氱殑鍙寔缁彂灞�(Gao et al, 2010)銆傚洜姝�, 鏈夊繀瑕佸澶ч粍楸艰繘琛屽搧璐ㄦ敼鑹�, 鍩硅偛鍑哄叿鏈夌敓闀垮揩銆佹姉鐥呭己銆佷綋鍨嬭倝璐ㄥソ銆佽€愪綆娓╃瓑鎬х姸鐨勪紭鑹搧绉嶃€�

DNA鍒嗗瓙鏍囪鏄牴鎹釜浣撻棿鍩哄洜缁凞NA鐨勫鎬佹€у彂灞曡捣鏉ョ殑涓€绫婚仐浼犳爣璁版妧鏈�, 鐩告瘮褰㈡€佸鏍囪銆佺粏鑳炲鏍囪銆佺敓鐗╁寲瀛︽爣璁板叿鏈変竴瀹氱殑浼樿秺鎬�(榄忎笢鏃虹瓑, 2001), 宸插箍娉涘簲鐢ㄤ簬姘翠骇鍔ㄧ墿閬椾紶鑲茬銆傚ぇ榛勯奔閬椾紶鑲茬涔熸櫘閬嶉噰鐢―NA鍒嗗瓙鏍囪鎶€鏈€�鐜嬪織鍕囩瓑(2002)閲囩敤AFLP鎶€鏈�(Amplified fragment length polymorphism)鍒嗘瀽鏄剧ず, 澶ч粍楸奸噹鐢熺兢浣撳拰2涓吇娈栫兢浣�, 2涓寤哄吇娈栧ぇ榛勯奔缇や綋鐨勯仐浼犲鏍锋€т綆浜庨噹鐢熺兢浣撱€�鏉庢槑浜戠瓑(2003)閲囩敤RAPD鎶€鏈�(Random amplified polymorphic DNA)鍒嗘瀽琛ㄦ槑, 璞″北娓綉绠卞吇娈栧ぇ榛勯奔缇や綋閬椾紶澶氭牱鎬ф按骞宠緝浣庛€�鏉庨箯椋炵瓑(2008)閲囩敤楸肩嚎绮掍綋DNA鐨勭粏鑳炶壊绱�b(Cytochrome b, Cytb)鍩哄洜鐗囨澶氭€佹€у彲浠ュ尯鍒嗗ぇ榛勯奔銆侀驳楸煎拰缇庡浗绾㈤奔銆�鐜嬫檽娓呯瓑(2008)閲囩敤AFLP鍜孲SR鎶€鏈�(Simple sequence repeats)瀵逛翰鏈笌鏉備氦瀛愪唬鍒嗘瀽缁撴灉琛ㄦ槑, 鏉備氦瀛愪唬涓庢瘝鏈ぇ榛勯奔涔嬮棿鐨勯仐浼犲悓璐ㄦ€ф瀬楂�, 灞炰簬寮傛簮绮惧瓙璇卞澶ч粍楸奸泴鏍稿彂鑲蹭釜浣撱€�瀹佸渤(2007)鍒嗙鑾峰緱鐨凙FLP鍜孲SR鏍囪搴旂敤浜庡ぇ榛勯奔鐨勯泴鎬у拰闆勬€ц繛閿佸浘璋辩殑鏋勫缓, 鍚屾椂纭畾浜嗗ぇ榛勯奔鎬у埆鍐冲畾鏈哄埗銆傛澶�, 涔熼檰缁瓫閫夎幏寰楄澶氭湁浠峰€肩殑SSR鏍囪(Guo et al, 2005; Chang et al, 2009)銆傛棭鏈烡NA鍒嗗瓙鏍囪鎶€鏈富瑕佸簲鐢ㄤ簬澶ч粍楸奸仐浼犲鏍锋€ф娴嬨€佺郴璋辩‘璁ゃ€侀仐浼犺繛閿佸浘璋辩殑鏋勫缓涓�(Ye et al, 2014)銆傝繎骞存潵, 鐮旂┒鑰呬富瑕佽嚧鍔涗簬閲囩敤DNA鍒嗗瓙鏍囪鎶€鏈瓫閫夋€х姸鐩稿叧鏍囪銆傚垬璐ゅ痉绛夐噰鐢ㄥ井鍗槦鏍囪鎶€鏈涓嶅悓澶ч粍楸煎绯诲拰缇や綋杩涜鍒嗘瀽, 绛涢€夊埌涓庡ぇ榛勯奔鐢熼暱鎬х姸绱у瘑鐩稿叧鐨勫井鍗槦鏍囪(鍒樿搐寰风瓑, 2012, 2013; 鍙跺崕绛�, 2014)銆傝枦鑹箟绛�(2013)鐮旂┒琛ㄦ槑澶ч粍楸艰倢鑲夌敓闀挎姂鍒剁礌鍩哄洜3鈥欑闈炵紪鐮佸尯寰崼鏄熷簭鍒楀鎬佹€т笌澶ч粍楸间綋闀裤€佷綋璐ㄩ噺涔嬮棿鐨勭浉鍏崇郴鏁版病鏈夎揪鍒版樉钁楁按骞炽€備絾鐢熼暱鎬х姸鐩稿叧鏍囪鍙戞帢杈冨皯, 姝ゅ鏄惁鍙敤浜庣敓浜у疄璺佃繕闇€杩涗竴姝ラ獙璇�, 鍥犳杩橀渶缁х画绛涢€夌敓闀挎€х姸鐩稿叧鏍囪銆�

澶氭牱鎬ц姱鐗囨妧鏈�(Diversity arrays technology, DArT)鏄竴绉嶅熀浜庡熀鍥犺姱鐗囨妧鏈殑DNA鎸囩汗鍥捐氨鍒嗘瀽鏂规硶, 鍙箍娉涚敤浜庢娴嬪拰鍒嗘瀽鍔ㄧ墿銆佹鐗╁拰寰敓鐗╃殑DNA宸紓浠ュ強鏋勫缓閬椾紶鍥捐氨銆丵TL瀹氫綅鍜屽搧绉嶆寚绾瑰浘璋遍壌瀹�(S谩nchez-Sevilla et al, 2015)銆備笌甯歌鎶€鏈浉姣�, DArT涓嶉渶瑕佹槑纭墿绉嶇殑鍩哄洜缁凞NA搴忓垪淇℃伅, 鍏锋湁楂橀€氶噺鍜屼綆鎴愭湰鐨勬樉钁楃壒鐐�, 鍏嬫湇浜嗕互寰€璺戠數娉冲嚌鑳朵负涓荤殑鏍囪鎶€鏈骇閲忎綆銆佹垚鏈珮銆佽€楁椂闀裤€佽嚜鍔ㄥ寲绋嬪害浣庣瓑缂虹偣, 鍙敤灏戦噺鎴愭湰灏卞彲杩涜鍏ㄥ熀鍥犵粍鐨勯珮閫氶噺鍥捐氨鍒嗘瀽銆傜洰鍓嶈鎶€鏈凡鎴愬姛鐢ㄤ簬姘寸ɑ銆佸ぇ楹︺€佸皬楹︺€佹补鑿溿€佹鏍戙€佽嫻鏋溿€佹湪钖€佹嫙鍗楄姤銆佹湪璞嗐€佸ぇ楹︾梾鍘熻弻銆佹矙闂ㄦ皬鑿岀瓑鐢熺墿鐨勯仐浼犺繛閿佸浘璋变互鍙婂熀鍥犲畾浣嶇爺绌朵腑(Hackl et al, 2010; Schouten et al, 2012)銆傚湪姘翠骇鍔ㄧ墿鐨勭爺绌朵腑浠呰璇ユ妧鏈簲鐢ㄤ簬涓夌枺姊瓙锜瑰湴鐞嗙缇ゅ鏍锋€у垎鏋�(鑽f檾濠х瓑, 2014)銆�

鏈爺绌舵棬鍦ㄩ噰鐢―ArT鎶€鏈壌瀹氫笌澶ч粍楸间綋闀跨浉鍏崇殑DArT鏍囪銆傞鍏堟寜鍒嗙缇や綋鏍囪鍏宠仈鍒嗘瀽娉曠瓫閫夆€滀笢娴�1鍙封€濆ぇ榛勯奔浣撻暱鐩稿叧鐨凞ArT鏍囪, 鍚庣画杩涗竴姝ラ獙璇佸叾鐩稿叧鎬�, 浠ユ湡涓哄ぇ榛勯奔閫夎偛鍜岀璐ㄨ祫婧愬埄鐢ㄦ彁渚涙湁鐢ㄥ弬鑰冭祫鏂欍€�

1 鏉愭枡涓庢柟娉� 1.1 鏍峰搧閲囬泦

2012骞�11鏈堜粠瀹佹尝璞″北娓咕姘翠骇鑻楃鏈夐檺鍏徃缃戠鍏绘畺鐨勨€滀笢娴�1鍙封€濆ぇ榛勯奔(1榫�)涓寫閫夊仴搴锋棤鎹熶激鐨勫ぇ榛勯奔199灏�, 娴嬮噺姣忔潯楸肩殑浣撻暱, 骞跺湪楸奸硟鐩栧唴渚ц緝杞儴浣嶆鍏ョ數瀛愭爣璁般€傜劧鍚庡垎鍒皢鍏舵斁鍏ユ按娉ユ睜涓殏鍏汇€備娇鐢⊿PSS 17.0杞欢缁熻鍒嗘瀽, 鍒嗗埆寤虹珛浣撻暱鐨勬鎬佸垎甯冨浘, 鍙栦綋闀夸綅浜�10%鐨勯珮鍊间釜浣撹涓衡€滄瀬绔ぇ缇や綋鈥�(20灏�), 10%浣庡€间釜浣撹涓衡€滄瀬绔皬缇や綋鈥� (20灏�)銆�

1.2 鍩哄洜缁勪唬琛ㄦ€NA鐗囨鏂囧簱鏋勫缓

鏂囧簱鏋勫缓鏂规硶鍙傜収Jaccoud绛�(2001)鎻忚堪銆傞噰鐢ㄩ厷-姘豢娉曟彁鍙栧熀鍥犵粍DNA, 骞跺皢鈥滄瀬绔ぇ缇や綋鈥濆拰鈥滄瀬绔皬缇や綋鈥濈殑澶ч粍楸煎熀鍥犵粍DNA绛夐噺娣峰悎銆�500ng娣峰悎鍩哄洜缁凞NA鐢ㄥ垏鍓查鐜囦綆鐨勯檺鍒舵€у唴鍒囬叾Pst鈪犲垎鍒笌鍒囧壊棰戠巼楂樼殑Alu鈪犮€�Ban鈪°€�Bsp1286I銆�BstNI銆�Hae鈪€€�Rsa鈪犲拰Taq鈪犵粍鍚堣繘琛岄叾鍒囥€傚湪T4 DNA杩炴帴閰朵綔鐢ㄤ笅, 绾寲鐨凞NA杩炴帴涓�Pst鈪犵壒寮傛€ф帴澶�(Wenzl et al, 2004)銆傝繛鎺ヤ骇鐗╀綔涓烘ā鏉跨敤浜庡悗缁璓CR鎵╁, 鎵€鐢ㄥ紩鐗╀负DArT-Pst鈪犲紩鐗�(Wenzl et al, 2004), 鍙嶅簲绋嬪簭濡備笅: 94掳C鍙樻€�5min鍚�, 浠ヤ笅绋嬪簭閲嶅35涓惊鐜�, 94掳C鍙樻€�30s, 53掳C澶嶆€�30s, 72掳C寤朵几1min, 寰幆瀹屾垚鍚�72掳C寤朵几鍙嶅簲10min銆傛墿澧炰骇鐗╁厠闅嗚嚦杞戒綋pMD19-T, 杞寲澶ц偁鏉嗚弻TOP10F骞舵秱甯冧簬鍚皑鑻勯潚闇夌礌鍜孹-gal鐨凩B鍩瑰吇鍩轰笂銆�

1.3 鍩哄洜缁凞NA澶嶆潅鎬ч檷浣庢柟娉曠殑浼樺寲 1.3.1 鎺㈤拡鍒跺鍙婅姱鐗囩偣鍒�

浠庝唬琛ㄦ€у熀鍥犵粍DNA鏂囧簱涓殢鏈烘寫閫夊崟鑿岃惤, 鍒╃敤璐ㄧ矑杞戒綋涓婄殑閫氱敤寮曠墿M13F-47鍜孧13R-48瀵规彃鍏ョ殑DNA鐗囨杩涜PCR鎵╁, 浜х墿鐢�1鍊嶄綋绉紓涓欓唶娌夋穩銆傛瘡涓�7绉嶉檷浣庡熀鍥犵粍澶嶆潅鎬ф柟娉曞熀鍥犵粍浠h〃鎬NA鐗囨鏁颁负840涓€傚湪鑺墖涓竷缃川鎺ф帰閽�, 闃存€у鐓ф帰閽�, 闃虫€у鐓ф帰閽�, 绌虹櫧瀵圭収鎺㈤拡, 宸ヤ綔鎺㈤拡銆傛瘡涓帰閽堝寘鍚笁涓噸澶嶃€傛瘡寮犺姱鐗囧寘鍚�4涓偣闃�, 姣忎釜鐐归樀25琛屻€�27鍒�, 姣忎釜鐐圭殑浣嶇疆鐢ㄢ€滆鏍�-鍒楁爣鈥濊〃绀恒€傚叾涓�1-1鈥�1-3涓鸿川鎺ф帰閽�, 1-19鈥�1-21涓洪槼鎬у鐓ф帰閽�, 1-7鈥�1-18銆�1-22鈥�2-3涓洪槾鎬у鐓ф帰閽�, 2-4鈥�25-12涓哄伐浣滄帰閽�, 1-4鈥�1-6銆�25-13鈥�25-27涓虹┖鐧藉鐓ф帰閽堛€備粠Pst鈪�/Alu鈪犮€�Pst鈪�/Ban鈪°€�Pst鈪�/Bsp1286I銆�Pst鈪�/BstNI銆�Pst鈪�/Hae鈪€€�Pst鈪�/Rsa鈪犮€�Pst鈪�/Taq鈪犳枃搴撲腑鑾峰緱鐨�840涓熀鍥犵粍浠h〃鎬NA鐗囨渚濇鎺掑竷鍦�4涓偣闃典腑銆傞噰鐢ㄦ櫠鑺疭martArrayerTM 48鐐规牱浠繘琛岀偣鍒躲€�

1.3.2 鑽у厜鏍囪鍩哄洜缁勪唬琛ㄦ€NA鐗囨鐨勫埗澶�

鐢∕13F-47鍜孧13R-48寮曠墿瀵规湭鎻掑叆澶栨簮DNA鐗囨鐨勮浇浣撹繘琛孭CR鎵╁, 璇CR浜х墿浣滀负reference DNA銆傜粡涔欓唶娌夋穩鍚�, 鍔犲叆20渭L鐏弻姘存憾瑙�, 鏀锯€�30掳C鍐扮淇濆瓨澶囩敤銆�

閲囩敤閰�-姘豢娉曟彁鍙栧ぇ榛勯奔鈥滄瀬绔ぇ缇や綋鈥濅笌鈥滄瀬绔皬缇や綋鈥濆熀鍥犵粍DNA, 涓ょ粍DNA鍏堝垎鍒娇鐢�7缁勯檺鍒舵€у唴鍒囬叾(Pst鈪�/Alu鈪犮€�Pst鈪�/Ban鈪°€�Pst鈪�/Bsp1286I銆�Pst鈪�/BstNI銆�Pst鈪�/Hae鈪€€�Pst鈪�/Rsa鈪犮€�Pst鈪�/Taq鈪�)闄嶄綆鍩哄洜缁勫鏉傛€�, 鍐嶅姞Pst鈪犵壒寮傛€ф帴澶�, 鎺ョ潃鐢�Pst鈪犲紩鐗╁鍔犳帴澶翠骇鐗╄繘琛孭CR鎵╁, 鏈€鍚庢墿澧炰骇鐗╀娇鐢―NAmate娌夋穩娴撶缉10鍊嶄綋绉€�

鍙�150ng鍩哄洜缁勪唬琛ㄦ€NA鐗囨鍙樻€у悗鐢―ecaLabel DNA Labeling Kit杩涜Cy3鏍囪, 鍔犲叆鍚崄纰卞熀闅忔満寮曠墿鐨�5脳缂撳啿娑层€丮ixC銆丆y5-dCTP銆乪xo-Klenow fragment鍏�2.1渭L, 37掳C瀛佃偛10min鍚�, 鍔犲叆dNTPs 0.4渭L, 37掳C瀛佃偛30min, 鍔犲叆0.1渭L EDTA (pH 8.0)缁堟鍙嶅簲銆傚彇150ng reference DNA鍙樻€у悗鐢―ecaLabel DNA Labeling Kit杩涜Cy5鏍囪銆�

1.3.3 鑺墖鏉備氦

Cy3鍜孋y5鏍囪鍙嶅簲浜х墿娣峰悎, 鍐嶅姞鍏�1渭L椴戠簿DNA(10g/L)鍜�50渭L ExpressHyb鈩㈡潅浜ゆ恫娣峰悎鍚�, 96掳C鍙樻€�3min, 鍐版荡楠ゅ喎1min銆傚皢涓婅堪鍙嶅簲浜х墿鍔犲叆棰勫鐞嗙殑DArT鑺墖涓�, 鍦ㄦ櫠鑺�鏉備氦浠腑杩涜鏉備氦(65掳C瀛佃偛杩囧銆傛潅浜ゅ悗鍏堢敤0.3脳SSC, 0.1% SDS娓呮礂涓€娆�, 鍐嶇敤0.06脳SSC娓呮礂涓ゆ, 绂诲績鐢╁共銆�

1.3.4 鑺墖鐨勬壂鎻忎笌鏁版嵁澶勭悊

鏉備氦鍚庨噰鐢ㄦ櫠鑺� LuxScanTM 10K-A鍙岄€氶亾婵€鍏夊叡鑱氱劍鎵弿浠繘琛屾壂鎻�, 骞剁敤LuxScan3.0杞欢杩涜鏁版嵁鐨勬彁鍙栥€傝嫢瀵瑰簲鐨剅eference DNA鏉備氦鑽у厜寮哄害杈冨急, 鍒欏睘浜庡潖鐐�, 寮冧箣銆傝川閲忕鍚堟潯浠剁殑鎺㈤拡, 鍏跺搴旂殑鑽у厜寮哄害鎸夌収lg[Cy3 Target/Cy5 Reference]杩涜璁$畻鍧囦竴鍖栥€傚埄鐢ㄦā绯奀-鍧囧€艰仛绫诲垎鏋愭硶(妯$硦搴︿负1.5)灏嗗綊涓€鍖栧悗鐨勮姱鐗囦俊鍙峰€煎垎涓�2缁勮仛绫荤皣(cluster), 濡傛灉璁$畻鍑虹殑鑱氱被绨囦箣闂存柟宸嚦灏戝ぇ浜庢€绘柟宸殑80%, 鍒欒涓烘鎺㈤拡鍏锋湁澶氭€佹€�, 妯$硦C-鍧囧€艰仛绫诲垎鏋愭硶鍙皢鍏跺湪涓嶅悓鑺墖鏍锋湰鍐呭垎鎴�0/1涓ょ粍绫诲埆(Wenzl et al, 2004)銆傞噰鐢ˋNOVA鍗曚晶妫€楠�(one-way ANOVA)鍒嗘瀽缁勫樊寮傛爣璁般€傝绠�P鍊笺€�q鍊煎拰FDR, 骞跺埗浣滅浉搴旂殑鏁g偣鍥俱€�

1.4 澶ч粍楸肩敓闀跨浉鍏冲垎瀛愭爣璁扮殑绛涢€�

浠�Pst鈪�/Rsa鈪犱唬琛ㄦ€у熀鍥犵粍DNA鏂囧簱涓殢鏈烘寫閫�3360涓厠闅�, PCR鎵╁鎻掑叆鐗囨, 閲嶆柊鐐瑰埗鑺墖銆傚湪鑺墖涓竷缃川鎺ф帰閽�, 闃存€у鐓ф帰閽�, 闃虫€у鐓ф帰閽�, 绌虹櫧瀵圭収鎺㈤拡, 宸ヤ綔鎺㈤拡銆傛瘡涓帰閽堝寘鍚笁涓噸澶嶃€傛瘡寮犺姱鐗囧寘鍚�16涓偣闃�, 姣忎釜鐐归樀鐨勮缃悓1.3.1銆傚悇鍙�500ng鍩哄洜缁凞NA, 鍒嗗埆鐢�Pst鈪犱笌Rsa鈪犵粍鍚堣繘琛屽弻閰跺垏銆傞叾鍒囧悗鍔�Pst鈪犵壒寮傛€ф帴澶�, 鐢―ArT-Pst鈪犲紩鐗╁紩鐗╁閰跺垏浜х墿杩涜PCR鎵╁銆傝崸鍏夋爣璁板熀鍥犵粍DNA浠h〃鎬х墖娈电殑鍒跺鏂规硶鍚�1.3.2銆傝姱鐗囬澶勭悊銆佹潅浜ゃ€佹壂鎻忋€佹暟鎹彁鍙栧強鏁版嵁鍒濇澶勭悊鏂规硶鍚�1.3.3鍜�1.3.4銆�

1.5 澶ч粍楸肩敓闀跨浉鍏�DArT鏍囪鐨勯獙璇�

鍦ㄥ悗鏈熼獙璇佸疄楠屼腑, 閲嶆柊鍙�177灏剧綉绠卞吇娈栫殑鍋ュ悍銆佹棤鎹熶激1榫勨€滀笢娴�1鍙封€濆ぇ榛勯奔銆備娇鐢⊿PSS 17.0杞欢缁熻鍒嗘瀽寤虹珛浣撻暱鐨勬鎬佸垎甯冨浘銆傝繖涓兢浣撴瘡涓釜浣撳熀鍥犵粍DNA浠h〃鎬х墖娈靛埗澶囥€佽姱鐗囬澶勭悊銆佹潅浜ゃ€佹壂鎻忋€佹暟鎹彁鍙栧強鏁版嵁鍒濇澶勭悊鏂规硶鍚�1.3.2鈥� 1.3.4銆傜瓫閫夎幏寰楃殑鍊欓€塂ArT鏍囪杩涜娴嬪簭, 鍚屾椂鐢˙LAST2GO (http://www.blast2go.org)杞欢瀵归壌瀹氱殑DArT鏍囪杩涜鍩哄洜鍔熻兘娉ㄩ噴銆�

2 缁撴灉 2.1 澶ч粍楸间綋闀挎暟鎹粺璁�

闅忔満閫夋嫨199涓ぇ榛勯奔鏍锋湰娴嬮噺鍏朵綋闀挎暟鎹€傚疄楠岀兢浣撲腑鐨勪綋闀挎渶澶у€间负16.30cm銆佹渶灏忓€间负11.50cm, 鍧囧€间负13.45cm, 鏍囧噯鍋忓樊1.0337銆傜粡杩嘢hapiro-Willie杩囩▼杩涜姝f€佸垎甯冩楠�, 宄板害涓�0.192, 鍋忓害涓衡€�0.210, 璁$畻寰楀埌P=0.257, 鏍峰搧绗﹀悎姝f€佸垎甯�(P > 0.05)銆傚洜鑰屾牴鎹噰鐢ㄥ垎绂荤兢浣撳垎缁勫垎鏋愭硶(Bulked Segregate Analysis, BSA)寤虹珛鍏充簬浣撻暱鐨勬鎬佸垎甯冨浘(鍥� 1), 鍦ㄥ悇缇や綋涓€夊彇10%鐨勯珮鍊间釜浣撳嵆浣撻暱澶т簬14.80 cm鐨勮涓烘瀬绔ぇ缇や綋, 閫夊彇10%鐨勪綆鍊间釜浣撳嵆浣撻暱灏忎簬12.00 cm鐨勮涓烘瀬绔皬缇や綋, 涓ょ粍涔嬮棿浣撻暱宸紓鏋佹樉钁�(P < 0.01)銆傚彲鐢ㄤ簬涓庣敓闀跨浉鍏矰ArT鏍囪鐨勫垵姝ョ瓫閫夈€�

鍥� 1 澶ч粍楸间綋闀挎鎬佸垎甯冮鐜囩洿鏂瑰浘 Fig. 1 Normal distribution frequency histogram of body length of large yellow croaker
2.2 澶ч粍楸煎熀鍥犵粍浠h〃鎬�DNA鐗囨鏂囧簱鐨勬瀯寤�

鏈爺绌朵腑澶ч粍楸煎熀鍥犵粍DNA瀹屾暣, 绾害楂�, 鏃燫NA姹℃煋(鍥� 2A)銆傚皢涓嶅悓浣撻暱鐨勫ぇ榛勯奔娣峰悎鍚�, 鍒嗗埆鐢�Pst鈪�/Alu鈪犮€�Pst鈪�/Ban鈪°€�Pst鈪�/Bsp1286I銆�Pst鈪�/ BstNI銆�Pst鈪�/Hae鈪€€�Pst鈪�/Rsa鈪犮€�Pst鈪�/Taq鈪犻叾鍒囧悗绾寲(鍥� 2B)銆傚湪T4 DNA杩炴帴閰朵綔鐢ㄤ笅, 绾寲鐨凞NA閰跺垏鐗囨涓�Pst 鈪犵壒寮傛€ф帴澶磋繛鎺ャ€傝繛鎺ヤ骇鐗╀綔涓烘ā鏉胯繘琛屽悗缁璓CR鎵╁(鍥� 2C)銆侾CR浜х墿鍏嬮殕鑷硃MD19-T杞戒綋鍚庤浆鍖栧ぇ鑲犳潌鑿孴op10F鈥�, 鎵€寰�7涓熀鍥犵粍浠h〃鎬NA鏂囧簱婊村害鈮�105(琛� 1), 闃虫€у厠闅嗗钩鍧囨彃鍏ョ墖娈甸暱搴� > 500bp(鍥� 2D鈥擩), 绗﹀悎DArT鑺墖鐐瑰埗瑕佹眰銆�

鍥� 2 澶ч粍楸煎熀鍥犵粍浠h〃鎬NA鐗囨鏂囧簱鏋勫缓 Fig. 2 Construction of genomic representations library of large yellow croaker 娉�: A:涓嶅悓浣撻暱澶ч粍楸煎熀鍥犵粍DNA, M: 1kb DNA ladder, A1: x725, A2: x784, A3: x798, A4: x658, A5: x625; A6: x827; B:娣峰悎鍩哄洜缁凞NA閰跺垏妫€娴�(5渭L), M: 1kb DNA ladder, B1: Pst鈪犲拰Alu鈪�, B2: Pst鈪犲拰Ban鈪�, B3: Pst鈪犲拰Bsp1286I, B4: Pst鈪犲拰BstNI, B5: Pst鈪犲拰Hae鈪�, B6: Pst鈪犲拰Rsa鈪�, B6: Pst I鍜�Taq I; C:鍔�pst I鎺ュご鍚嶱CR鎵╁; D鈥擩: 7涓熀鍥犵粍DNA浠h〃鎬ф枃搴撴彃鍏ョ墖娈电數娉虫娴嬬粨鏋�, 1鈥�24:闅忔満閫夊彇鐨勫厠闅�

琛� 1 7涓熀鍥犵粍DNA浠h〃鎬ф枃搴撶敱浜庢墍鐢ㄩ檺鍒舵€у唴鍒囬叾缁勫悎涓嶅悓鑰岄€犳垚鐨勫樊寮傚厠闅嗘暟鍜屽鎬佹€х巼 Tab. 1 The number of unique clone and polymorphism level in genomic representative library differing in enzymes used for co-digestion
鍚嶇О 搴撳 骞冲潎鎻掑叆鐗�
娈靛ぇ灏�(bp)
澶氭€佹€�
鍏嬮殕鏁�
澶氭€佹€х巼
(%)
Pst鈪�/Alu鈪犳枃搴� 8.0脳105 886 58 6.90
Pst鈪�/Ban鈪℃枃搴� 1.0脳106 691 117 13.93
Pst鈪�/Bsp1286I鏂囧簱 4.0脳106 820 68 8.10
Pst鈪�/BstNI鏂囧簱 1.2脳106 607 119 14.17
Pst鈪�/Hae鈪㈡枃搴� 4.0脳106 623 110 13.10
Pst鈪�/Rsa鈪犳枃搴� 4.0脳106 765 148 17.62
Pst鈪�/Taq鈪犳枃搴� 1.2脳106 721 140 16.67
2.3 闄嶄綆鍩哄洜缁勫鏉傛€ф柟娉�

澶ч粍楸尖€滄瀬绔ぇ缇や綋鈥濅笌鈥滄瀬绔皬缇や綋鈥濇牱鍝佹彁鍙栧熀鍥犵粍DNA, 鍒嗗埆閲囩敤7绉嶉叾鍒囩粍鍚�(Pst鈪�/Alu鈪犮€�Pst鈪�/Ban鈪°€�Pst鈪�/Bsp1286I銆�Pst鈪�/BstNI銆�Pst鈪�/Hae鈪€€�Pst鈪�/Rsa鈪犮€�Pst鈪�/Taq鈪�)闄嶄綆鍩哄洜缁勫鏉傛€с€傜粡鏍囪鍚庣殑DNA鐗囨鍒嗗埆涓庡悇鑷狣ArT鑺墖鏉備氦, 鏉備氦缁撴灉娓呮櫚鍙潬銆�7绉嶉叾鍒囩粍鍚堜腑, Pst鈪�/Rsa鈪犱笉浠呭彲闄嶄綆鍩哄洜缁勫鏉傛€�, 涓斿鎬佹€х巼鏈€楂�(17.62%)(琛� 1)銆傚洜姝�, 閫夋嫨Pst鈪�/Rsa鈪犲熀鍥犵粍浠h〃鎬NA鐗囨鏂囧簱鐢ㄤ簬澶ч粍楸间綋闀跨浉鍏矰ArT鏍囪鐨勭瓫閫夈€�

2.4 澶ч粍楸肩敓闀跨浉鍏矰ArT鏍囪鐨勭瓫閫�

閲嶆柊鐐瑰埗鐨�Pst鈪�/Rsa鈪� DArT鑺墖, 鍏跺厠闅嗘暟澧炲姞鑷�3360涓�(鍥� 3A)銆傚苟鎸夌収涓婅堪鏂规硶鍒跺鈥滄瀬绔ぇ缇や綋鈥濅笌鈥滄瀬绔皬缇や綋鈥�Pst鈪�/Rsa鈪犲ぇ榛勯奔鍩哄洜缁勪唬琛ㄦ€NA鐗囨, 骞跺姞涓奀y3鑽у厜鏍囪, reference DNA涓篊y5鑽у厜鏍囪銆傛潅浜ゅ悗杩涜鑺墖鎵弿(鍥� 3A)鍜屾暟鎹彁鍙栥€傛瘡寮犺姱鐗囩粡杩囧綊涓€鍖栧鐞嗗悗, 閫氳繃鐢ㄦā绯奀-鍧囧€艰仛绫诲垎鏋愭硶鑾峰緱0/1鐭╅樀銆傛牴鎹绠楁墍寰楃殑p鍊艰幏寰楁暎鐐瑰浘(鍥� 2B)銆傛暎鐐瑰浘涓粦鑹蹭负鏃犲樊寮備綅鐐�, 绾㈣壊涓哄樊寮傛樉钁椾綅鐐�(P鈮�0.05), 鍚勪綅鐐归泦涓湪瀵硅绾块檮杩�, 鍋忕瀵硅绾胯秺澶ц秺瀹规槗鍛堢幇绾㈣壊銆備笂杩板樊寮備綅鐐逛腑鍙湁18涓狣ArT鍊欓€夋爣璁板湪鈥滄瀬绔ぇ缇や綋鈥濅笌鈥滄瀬绔皬缇や綋鈥濅腑鑱氱被缁撴灉绋冲畾, 涓旂粍闂�P < 0.01(琛� 2), 鍏朵腑17涓负鈥滄瀬绔ぇ缇や綋鈥滵ArT鍊欓€夋爣璁�, 1涓€滄瀬绔皬缇や綋鈥滵ArT鍊欓€夋爣璁�(琛� 2)銆�

鍥� 3 x827鏍峰搧鏉備氦缁撴灉(A)鍙婃潅浜ゅ綊涓€鍖栦俊鍙�P鍊兼暎鐐瑰浘(B) Fig. 3 Result of DArT microarray assay of x827 (A) and the P value scatter plot of normalization signals from maximal length group and minimal length group (B)

琛� 2 鈥滄瀬绔ぇ缇や綋鈥濆拰鈥滄瀬绔皬缇や綋鈥�0/1鐭╅樀鍙婄粺璁″垎鏋� Tab. 2 The 0/1 matrix of maximal length group and minimal length group, and the statistics
鍊欓€夋爣璁� 鏋佺澶х兢浣� 鏋佺灏忕兢浣� P鍊� q鍊� FDR
Rsa鈪�1-05 0 1 9.96E-06 0.000493 0.000649
Rsa鈪�1-23 0 1 0.000119 0.002948 0.003886
Rsa鈪�4-73 0 1 8.25E-07 6.71E-05 8.84E-05
Rsa鈪�5-05 0 1 1.02E-06 7.72E-05 0.000102
Rsa鈪�5-23 0 1 3.8E-05 0.001442 0.001901
Rsa鈪�8-80 0 1 2.21E-07 2.09E-05 2.76E-05
Rsa鈪�9-38 1 0 0.000111 0.002806 0.003699
Rsa鈪�12-24 0 1 0.000281 0.005217 0.006877
Rsa鈪�12-18 0 1 2.57E-07 2.25E-05 2.96E-05
Rsa鈪�13-24 0 1 4.16E-06 0.000263 0.000347
Rsa鈪�14-11 0 1 9.81E-06 0.000493 0.000649
Rsa鈪�14-18 0 1 6.09E-08 7.69E-06 1.01E-05
Rsa鈪�14-73 0 1 0.001214 0.013949 0.018387
Rsa鈪�15-17 0 1 9.26E-05 0.002478 0.003267
Rsa鈪�16-85 0 1 7.01E-06 0.000399 0.000527
Rsa鈪�16-17 0 1 3.09E-06 0.000218 0.000288
Rsa鈪�14-79 0 1 7.02E-06 0.000399 0.000527
Rsa鈪�18-18 0 1 8.56E-06 0.000464 0.000612
2.5 澶ч粍楸肩敓闀跨浉鍏矰ArT鏍囪鐨勯獙璇�

涓洪獙璇佹墍绛涢€塂ArT鍊欓€夋爣璁扮殑鏈夋晥鎬�, 鍙堥噸鏂版寫閫変簡娴欐睙璞″北娓咕缃戠鍏绘畺鐨勨€滀笢娴�1鍙封€滷6浠eぇ榛勯奔(1榫�) 177灏惧ぇ榛勯奔, 杩欎釜缇や綋浣撻暱缁忚繃Shapiro-Willie杩囩▼杩涜姝f€佸垎甯冩楠�, 涔熺鍚堟鎬佸垎甯�(P > 0.05)銆備粠妫€楠岀粨鏋滃彲浠ョ湅鍒�, Rsa鈪�1-23绛�8涓狣ArT鏍囪浠嶄笌浣撻暱鎬х姸绱у瘑鐩稿叧(P < 0.01) (琛� 3)銆備负浜嗚繘涓€姝ョ‘瀹氱瓫閫夎幏寰楃殑澶ч粍楸糄ArT鍊欓€夋爣璁�, 灏嗕笂杩板€欓€夋爣璁拌繘琛屾祴搴�, 娴嬪簭缁撴灉鐢˙LAST2GO杞欢杩涜Blastn鍒嗘瀽銆傜粨鏋滄樉绀烘祴瀹氱殑搴忓垪涓�6涓负宸茬煡搴忓垪, 2涓负鏈煡搴忓垪(琛� 3)銆�

琛� 3 澶ч粍楸间綋闀跨浉鍏矰ArT鏍囪鍐嶆楠岃瘉缁撴灉 Tab. 3 Re-verification for body-length-related DArT markers in large yellow croaker
鍊欓€夋爣璁� 鐧诲綍鍙� 搴忓垪闀垮害 搴忓垪鎻忚堪 鏋佺澶х兢浣� 鏋佺灏忕兢浣� P鍊� q鍊� FDR
Rsa鈪�1-23 KX353586 445 Homo sapiens phosphatase complete cds 0 1 0.0001422 0.0005448 0.0024499
Rsa鈪�4-73 KX353587 789 Homo sapiens genomic chromosome
11q clone: rp11-complete sequences
0 1 1.22E-06 1.92E-05 8.64E-05
Rsa鈪�8-80 KX353588 224 Epinephelus coioides complement
component c3 complete cds
0 1 1.46E-06 2.12E-05 9.55E-05
Rsa鈪�9-38 KX353589 1042 鈥擭A鈥� 1 0 0.000195 0.000666 0.00299
Rsa鈪�14-11 KX353590 669 Homo sapiens serine hydrolase-like
2 transcript variant non-coding RNA
0 1 4.03E-06 0.000200 0.000195
Rsa鈪�16-85 KX353591 342 鈥擭A鈥� 0 1 2.62E-06 0.000113 0.000508
Rsa鈪�14-79 KX353592 450 glucan-beta-glucosidase 0 1 9.35E-06 8.47E-05 0.000380
Rsa鈪�18-18 KX353593 357 serine threonine protein kinase 0 1 8.61E-06 8.01E-05 0.000360
聽聽聽聽娉�: 鈥淣A鈥濊〃绀烘病鏈夋敞閲�
3 璁ㄨ

浼犵粺閫夎偛闇€瑕佺粡鍘嗗涓敓鍛藉懆鏈熸墠鑳藉垎绂诲嚭绋冲畾閬椾紶鐨勭粡娴庢€х姸銆傞殢鐫€鍒嗗瓙鐢熺墿瀛︽妧鏈殑杩呯寷鍙戝睍, 杩愮敤DNA鍒嗗瓙鏍囪鎶€鏈繘琛岄€夎偛, 浠庡垎瀛愭按骞崇爺绌朵笌姘翠骇鍔ㄧ墿浼樿壇缁忔祹鎬х姸鐩歌繛閿佺殑鍒嗗瓙鏍囪鏋佸ぇ鍦扮缉鐭簡閫夎偛鏃堕棿(鍒樿搐寰风瓑, 2013)銆傜洰鍓�, SSR鎶€鏈父鐢ㄤ簬瀵绘壘涓庣敓闀裤€佹姉閫嗙瓑鎬х姸绱у瘑杩為攣鎴栫浉鍏虫爣璁般€傚妯婁匠浣崇瓑(2009)鍏宠仈鍒嗘瀽寰楀埌7涓井鍗槦浣嶇偣涓庝綋閲嶃€佷綋闀垮拰浣撻珮鏄捐憲鐩稿叧(P < 0.05)鎴栨瀬鏄捐憲鐩稿叧(P < 0.01)銆�Yi绛�(2015)浠�100涓猄SR鏍囪涓壘鍒�8涓熀鍥犲骇涓�9涓熀鍥犲瀷涓庨硿楸肩敓闀挎€х姸(浣撻噸銆佷綋闀垮拰浣撻珮)鐩稿叧銆傜爺绌惰€呬篃璇曞浘閫氳繃鐢熼暱銆佹姉閫嗙瓑鎬х姸绱у瘑杩為攣鎴栫浉鍏虫爣璁版寚瀵煎ぇ榛勯奔閬椾紶鑲茬瀹炶返銆�楂樺浗寮虹瓑(2010)杩涜浜嗗ぇ榛勯奔鑰愪綆娓╂爣璁扮殑绛涢€�, 鎵惧埌涓€涓爣璁�(LYC0002)鍙兘涓庤€愪綆娓╂湁鍏炽€傚垬璐ゅ痉绛夐噰鐢ㄥ井鍗槦鏍囪鎶€鏈壌瀹氫簡LYC0088鍜孡YC0143涓庡ぇ榛勯奔涓嶅悓瀹剁郴鍜岀兢浣撶敓闀挎€х姸绱у瘑鐩稿叧(鍒樿搐寰风瓑, 2012, 2013; 鍙跺崕绛�, 2014)銆�钖涜壇涔夌瓑(2008)鐮旂┒琛ㄦ槑澶ч粍楸艰倢鑲夌敓闀挎姂鍒剁礌鍩哄洜3鈥欑闈炵紪鐮佸尯寰崼鏄熷簭鍒楀鎬佹€т笌澶ч粍楸间綋闀裤€佷綋璐ㄩ噺鏃犵浉鍏虫€с€�Ni绛�(2012)鍦ㄦ禉姹熷吇娈栧ぇ榛勯奔鐢熼暱鍩哄洜鍐呭惈瀛�1鐨�196浣峉NP(Single nucleotide polymorphysim)涓庝綋闀垮拰浣撻珮鐩稿叧, 鍦ㄤ袱涓兢浣撳ぇ榛勯奔鐢熼暱鍩哄洜鍐呭惈瀛�2鐨�692浣峉NP涓庝綋閲嶅叏闀挎樉钁楃浉鍏炽€傛湰鐮旂┒涓娆¢噰鐢―ArT鎶€鏈壌瀹氫簡8涓ぇ榛勯奔浣撻暱鐩稿叧DArT鏍囪, 鍏朵腑7涓负鈥滄瀬绔ぇ缇や綋鈥滵ArT鍊欓€夋爣璁�, 1涓€滄瀬绔皬缇や綋鈥滵ArT鍊欓€夋爣璁般€�

涓€鑸湁涓ょ鏂规硶绛涢€夊拰閴村畾姘翠骇鍔ㄧ墿鐩爣鎬х姸鐩稿叧鑱旂殑鍒嗗瓙鏍囪, 涓€绉嶆槸鍒嗙缇や綋鏍囪鍏宠仈鍒嗘瀽娉�, 璇ユ柟娉曞彲蹇€熻幏寰椾笌鐩殑鎬х姸杩為攣鐨勫垎瀛愭爣璁�, 缂虹偣鏄伒鏁忓害鍜岀簿纭害閮借緝浣�; 鍙︿竴绉嶄负闅忔満閫夋嫨缇や綋鏍囪鍏宠仈鍒嗘瀽娉�, 璇ユ柟娉曞彲鍏ㄩ潰鍒嗘瀽鎵€閫夌敤鐨勬爣璁�, 鍑嗙‘搴﹀拰绮剧‘搴﹁緝濂�, 缂虹偣鏄渶瑕佹娴嬬殑鏍锋湰閲忓ぇ鍜屽垎鏋愯垂鐢ㄨ緝楂�(妯婁匠浣崇瓑, 2009)銆傛湰鐮旂┒閲囩敤鍒嗙缇や綋鏍囪鍏宠仈鏋愭硶杩涜鍒濇绛涢€�, 鏍规嵁鈥滀笢娴�1鍙封€濆ぇ榛勯奔浣撻暱鏁版嵁鎸戝嚭鈥滄瀬绔ぇ缇や綋鈥濆拰鈥滄瀬绔皬缇や綋鈥�, 浠庝袱涓兢浣撲腑鑾峰緱18涓笌浣撻暱鐩稿叧DArT鍊欓€夋爣璁般€傞殢鍚庢柊缇や綋涓獙璇佺‘璁�Rsa鈪�1-23绛�8涓狣ArT鏍囪浠嶄笌浣撻暱鎬х姸绱у瘑鐩稿叧銆傜敱浜庝粛涓嶈兘淇濊瘉鏈爺绌朵腑鎵€绛涢€夊埌鐨勬爣璁板湪鍏跺畠缇や綋閫傜敤, 鍥犺€屽湪鍚庣画鐮旂┒涓皻闇€鎵╁ぇ缇や綋鐨勮妯″拰绫诲瀷, 杩涜澶氭柟姣旇緝杩涜杩涗竴姝ラ獙璇�, 涓轰笅涓€姝ュ熀鍥犺緟鍔╄偛绉嶃€佽繘涓€姝ユ彁楂樻€х姸閫夋嫨鐨勫噯纭€ф彁渚涗緷鎹€�

4 缁撹

鏈爺绌朵粠Pst鈪�/Rsa鈪犲熀鍥犵粍浠h〃DNA鐗囨鏂囧簱涓墿澧炶幏寰�3360涓熀鍥犵粍浠h〃鎬NA鐗囨, 鍒跺澶ч粍楸间綋闀跨浉鍏冲鏍锋€ц姱鐗囥€傛潅浜や俊鍙疯浆鎹负0/1鐭╅樀骞惰繘琛岀粺璁″垎鏋愮瓫閫�, 鍒濇鑾峰緱18涓ぇ榛勯奔浣撻暱鐩稿叧DArT鍊欓€夋爣璁般€備箣鍚庣粡杩囬獙璇佽〃鏄庝粛鏈�8涓狣ArT鏍囪涓庢柊缇や綋鐨勪綋闀跨浉鍏炽€傛湰鐮旂┒鎴愬姛搴旂敤DArT鎶€鏈瓫閫夊埌涓庝綋闀跨浉鍏虫爣璁�, 璇ユ柟娉曚篃鍙互搴旂敤浜庡叾瀹冪敓闀跨浉鍏虫€х姸鏍囪绛涢€夈€傚悓鏃舵湰鐮旂┒鎴愭灉鍙洿鎺ユ寚瀵煎ぇ榛勯奔浜哄伐閫夎偛宸ヤ綔; 涔熷彲浣滀负杩涗竴姝ョ爺绌跺ぇ榛勯奔鐢熼暱鐩稿叧鐨勯仐浼犺繛閿佸浘璋辨彁渚涘熀纭€, 骞跺鍏跺畠姘翠骇缁忔祹鍔ㄧ墿鐨勯仐浼犺偛绉嶇殑寤虹珛鎻愪緵鐞嗚渚濇嵁涓庡疄璺靛弬鑰冦€�

鍙傝€冩枃鐚�
鐜嬪織鍕�, 鐜嬭壓纾�, 鏋楀埄姘�, 绛�, 2002. 绂忓缓瀹樹簳娲嬪ぇ榛勯奔AFLP鎸囩汗澶氭€佹€х殑鐮旂┒. 涓浗姘翠骇绉戝, 9 (3) : 198鈥�202
鐜嬫檽娓�, 鐜嬪織鍕�, 璋腑鍥�, 绛�, 2008. 澶ч粍楸�(鈾€)涓庨(鈾�)鏉備氦鐨勯仐浼犲垎鏋�. 姘翠骇瀛︽姤, 32 (1) : 51鈥�57
鍙跺崕, 鍒樻磱, 鍒樿搐寰�, 绛�, 2014. 澶ч粍楸煎井鍗槦鏍囪涓庣敓闀挎€х姸鐨勭浉鍏冲垎鏋�. 瑗垮崡澶у瀛︽姤:鑷劧绉戝鐗�, 36 (3) : 27鈥�33
瀹佸渤, 2007.澶ч粍楸奸仐浼犺繛閿佸浘璋辩殑鏋勫缓.闆嗙編:闆嗙編澶у纭曞+瀛︿綅璁烘枃, 23-52 http://cdmd.cnki.com.cn/article/cdmd-10390-2007155211.htm
鍒樿搐寰�, 闊︿俊閿�, 钄℃槑澶�, 绛�, 2012. 澶ч粍楸�22涓井鍗槦鏍囪鍦‵1瀹剁郴涓殑鍒嗙鏂瑰紡鍙婁笌鐢熼暱鎬х姸鐨勭浉鍏冲垎鏋�. 姘翠骇瀛︽姤, 36 (9) : 1322鈥�1330
鍒樿搐寰�, 闅嬬彮鑹�, 鐜嬪織鍕�, 绛�, 2013. 澶ч粍楸煎揩闀跨浉鍏冲井鍗槦鏍囪鐨勭瓫閫変笌楠岃瘉. 姘寸敓鐢熺墿瀛︽姤, 37 (6) : 1036鈥�1043
鏉庢槑浜�, 寮犳捣鐞�, 钖涜壇涔�, 绛�, 2003. 缃戠鍏绘畺澶ч粍楸奸仐浼犲鏍锋€х殑鍚屽伐閰跺拰RAPD鍒嗘瀽. 涓浗姘翠骇绉戝, 10 (6) : 523鈥�525
鏉庨箯椋�, 鍛ㄦ案涓�, 寰愭眽绁�, 2008. 澶ч粍楸笺€侀楸煎強缇庡浗绾㈤奔绾跨矑浣揇NA鐨凜yt b鍩哄洜搴忓垪姣旇緝. 鍗楁柟姘翠骇, 4 (3) : 43鈥�47
鑽f檾濠�, 闄堝己, 鍙查洦绾�, 绛�, 2014. 鍩轰簬DArT鏍囪鐨勪笁鐤f瀛愯煿鍦扮悊绉嶇兢閬椾紶澶氭牱鎬у垎鏋�. 鐢熺墿瀛︽潅蹇�, 31 (2) : 18鈥�21
濮氬悍, 鐜嬫枃绛�, 鑰挎姊�, 绛�, 2008. 澶ч粍楸肩揣瀵嗚繛閿佄�-鍜屛�-鐝犺泲鐧藉熀鍥犻棿搴忓垪鍔熻兘鍒嗘瀽. 姘寸敓鐢熺墿瀛︽姤, 32 (3) : 413鈥�416
楂樺浗寮�, 甯哥帀姊�, 闊╁惎闇�, 绛�, 2010. 澶ч粍楸艰€愪綆娓╂€х姸鐩稿叧寰崼鏄熸爣璁扮殑绛涢€�. 閬椾紶, 32 (3) : 248鈥�253
妯婁匠浣�, 鐧戒繆鏉�, 鏉庡皬鎱�, 绛�, 2009. 澶у彛榛戦矆鐢熼暱鎬х姸鐨勫井鍗槦DNA鏍囪绛涢€�. 閬椾紶, 31 (5) : 515鈥�522
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澶ч粍楸�(Larimichthys crocea)鏂板搧绉嶁€滀笢娴�1鍙封€濅綋闀跨浉鍏崇殑DArT鏍囪绛涢€�
寰愬湥閽�,鏋楀媺,闂澗鏉�,鍙查洦绾�,鑻椾寒,鏉庢槑浜�,闄堢偗